Jonathan E. Hunter

MChem, Ph. D. web-enq@hunter.phd

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Data Science | Informatics | Metabolomics | Analytical Chemistry | Life Sciences

Metabolomics Scientific Database Curator at EMBL-EBI, bridging laboratory analytical chemistry through computational mass spectrometry to advance open data reuse and FAIR principles.

My expertise spans research domains and lifecycles - from marine lipidomics at Woods Hole Oceanographic Institution (including co-lead authorship in Science) and regulated, commercial bioanalytical chemistry at LGC, through to data science-driven curation and informatics infrastructure development.

Grounded in an MChem, a Ph. D. in phytoplankton lipidomics and a certification in Python Data Science I work at the intersection of metabolomics domain knowledge, analytical chemistry, and computational approaches. I am particularly focused on metabolomics data standards and scientific database development.


news

Sep 04, 2025 Happy to be recognised as "Co-author of the winning National Champion's research article for the Frontiers Planet Prize".
May 18, 2025 I am delighted to announce I have joined the Proteomics & Metabolomics team at the European Bioinformatics Institute (EMBL-EBI) as a Scientific Database Curator.
Feb 28, 2025 Take a look at my case study metabolomics data processing pipeline including modern methods such as deep learning based peak filtering (NeatMS) and GPU accelerated spectral database searching (SimMS).
Oct 02, 2024 Congratulations to Dr. Benjamin Van Mooy, my postdoctoral supervisor and mentor on his award of a prestigious MacArthur Fellowship, informally known as the “genius grant”.
Sep 13, 2024 Thrilled to share our latest publication, in the journal 𝘚𝘤𝘪𝘦𝘯𝘤𝘦.

selected publications

  1. Microbial dietary preference and interactions affect the export of lipids to the deep ocean
    Lars Behrendt*, Uria Alcolombri*, Jonathan E. Hunter*, and 11 more authors
    Science. *These authors contributed equally to this work. , Sep 2024
  2. Using High-Sensitivity Lipidomics To Assess Microscale Heterogeneity in Oceanic Sinking Particles and Single Phytoplankton Cells
    Jonathan E. Hunter, Helen F. Fredricks, Lars Behrendt, and 4 more authors
    Environmental Science & Technology, Nov 2021